Index

A

AdvectionTerm (class in festim.advection) as_fenics_constant() (in module festim.helpers) as_fenics_interp_expr_and_function() (in module festim.helpers)

as_mapped_function() (in module festim.helpers) assign_functions_to_species() (HydrogenTransportProblem method) AverageSurface (class in festim.exports) AverageVolume (class in festim.exports)

C

check_borders() (Mesh1D method) compute() (AverageSurface method) (AverageVolume method) (MaximumSurface method) (MaximumVolume method) (MinimumSurface method) (MinimumVolume method) (SurfaceFlux method) (TotalSurface method) (TotalVolume method) convert_advection_term_to_fenics_objects() (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) convert_input_value() (Value method) (VelocityField method) convert_source_input_values_to_fenics_objects() (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) CoupledTransientHeatTransferHydrogenTransport (class in festim.coupled_heat_hydrogen_problem) create_dirichletbc_form() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) create_expr_fenics() (InitialCondition method) create_flux_values_fenics() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method)

create_formulation() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) create_implicit_species_value_fenics() (HydrogenTransportProblem method) create_initial_conditions() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) create_new_value_function() (HenrysBC method) (SievertsBC method) create_solver() (HydrogenTransportProblemDiscontinuous method) (ProblemBase method) create_source_values_fenics() (HeatTransferProblem method) create_species_and_reaction() (Trap method) create_species_from_traps() (HydrogenTransportProblem method) create_subdomain() (VolumeSubdomain method) create_subdomain_formulation() (HydrogenTransportProblemDiscontinuous method) create_value() (FixedConcentrationBC method) (FixedTemperatureBC method) create_value_fenics() (FluxBCBase method) (ImplicitSpecies method) (ParticleFluxBC method) (SurfaceReactionBCpartial method)

D

define_boundary_conditions() (HydrogenTransportProblem method) (ProblemBase method) define_D_global() (HydrogenTransportProblem method) define_function_space() (HeatTransferProblem method) define_function_spaces() (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method) define_meshtags() (Mesh method) (Mesh1D method)

define_meshtags_and_measures() (ProblemBase method) define_surface_meshtags() (MeshFromXDMF method) define_surface_subdomain_dofs() (DirichletBCBase method) define_temperature() (HydrogenTransportProblem method) define_volume_meshtags() (MeshFromXDMF method) define_writer() (XDMFExport method) DirichletBCBase (class in festim.boundary_conditions)

E

explicit_time_dependent (Value property)

F

festim.advection module festim.boundary_conditions module festim.coupled_heat_hydrogen_problem module festim.exports module festim.heat_transfer_problem module festim.helpers module festim.helpers_discontinuity module festim.hydrogen_transport_problem module festim.initial_condition module festim.material module festim.mesh module

festim.problem module festim.reaction module festim.settings module festim.source module festim.species module festim.stepsize module festim.subdomain module festim.trap module find_species_from_name() (in module festim.species) FixedConcentrationBC (class in festim.boundary_conditions) FixedTemperatureBC (class in festim.boundary_conditions) FluxBCBase (class in festim.boundary_conditions)

G

generate_mesh() (Mesh1D method) get_D_0() (Material method) get_diffusion_coefficient() (Material method) get_E_D() (Material method)

get_E_K_S() (Material method) get_functions() (VTXSpeciesExport method) get_K_S_0() (Material method) get_max_stepsize() (Stepsize method) get_solubility_coefficient() (Material method)

H

HeatFluxBC (class in festim.boundary_conditions) HeatSource (class in festim.source) HeatTransferProblem (class in festim.heat_transfer_problem)

HenrysBC (class in festim.boundary_conditions) HydrogenTransportProblem (class in festim.hydrogen_transport_problem) HydrogenTransportProblemDiscontinuous (class in festim.hydrogen_transport_problem)

I

ImplicitSpecies (class in festim.species) InitialCondition (class in festim.initial_condition) initialise_exports() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method)

is_adapt() (Stepsize method) iterate() (HydrogenTransportProblemDiscontinuous method) (ProblemBase method)

L

legacy (Species property) locate_boundary_facet_indices() (SurfaceSubdomain method) (SurfaceSubdomain1D method)

locate_subdomain_entities() (VolumeSubdomain method) (VolumeSubdomain1D method) locate_subdomain_entities_correct() (VolumeSubdomain method)

M

Material (class in festim.material) MaximumSurface (class in festim.exports) MaximumVolume (class in festim.exports) Mesh (class in festim.mesh) Mesh1D (class in festim.mesh) MeshFromXDMF (class in festim.mesh) MinimumSurface (class in festim.exports) MinimumVolume (class in festim.exports) module festim.advection festim.boundary_conditions festim.coupled_heat_hydrogen_problem festim.exports festim.heat_transfer_problem festim.helpers festim.helpers_discontinuity festim.hydrogen_transport_problem festim.initial_condition festim.material festim.mesh festim.problem festim.reaction festim.settings festim.source festim.species festim.stepsize festim.subdomain festim.trap

N

next_milestone() (Stepsize method)

nmm_interpolate() (in module festim.helpers)

P

ParticleFluxBC (class in festim.boundary_conditions) ParticleSource (class in festim.source) post_processing() (HeatTransferProblem method) (HydrogenTransportProblem method) (HydrogenTransportProblemDiscontinuous method)

ProblemBase (class in festim.problem)

R

Reaction (class in festim.reaction) reaction_term() (Reaction method)

read_function_from_file() (in module festim.initial_condition) run() (HydrogenTransportProblemDiscontinuous method) (ProblemBase method)

S

Settings (class in festim.settings) SievertsBC (class in festim.boundary_conditions) SourceBase (class in festim.source) Species (class in festim.species) Stepsize (class in festim.stepsize)

SurfaceFlux (class in festim.exports) SurfaceQuantity (class in festim.exports) SurfaceReactionBC (class in festim.boundary_conditions) SurfaceReactionBCpartial (class in festim.boundary_conditions) SurfaceSubdomain (class in festim.subdomain) SurfaceSubdomain1D (class in festim.subdomain)

T

temperature_dependent (Value property) time_dependent (DirichletBCBase property) TotalSurface (class in festim.exports)

TotalVolume (class in festim.exports) transfer_meshtags_to_submesh() (in module festim.helpers_discontinuity) Trap (class in festim.trap)

U

update() (DirichletBCBase method) (FluxBCBase method) (Value method) (VelocityField method)

update_density() (ImplicitSpecies method)

V

Value (class in festim.helpers) VelocityField (class in festim.advection) VolumeQuantity (class in festim.exports)

VolumeSubdomain (class in festim.subdomain) VolumeSubdomain1D (class in festim.subdomain) VTXSpeciesExport (class in festim.exports)

W

write() (SurfaceQuantity method) (VolumeQuantity method) (XDMFExport method)

X

XDMFExport (class in festim.exports)